navigate.model.metadata\_sources.bdv\_metadata.BigDataViewerMetadata
====================================================================

.. currentmodule:: navigate.model.metadata_sources.bdv_metadata

.. autoclass:: BigDataViewerMetadata
   :members:
   :show-inheritance:
   :inherited-members:

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~BigDataViewerMetadata.__init__
      ~BigDataViewerMetadata.affine_matrix_to_stage_positions
      ~BigDataViewerMetadata.bdv_rotate_transform
      ~BigDataViewerMetadata.bdv_shear_transform
      ~BigDataViewerMetadata.bdv_xml_dict
      ~BigDataViewerMetadata.get_affine_parameters
      ~BigDataViewerMetadata.parse_xml
      ~BigDataViewerMetadata.set_from_configuration_experiment
      ~BigDataViewerMetadata.set_from_dict
      ~BigDataViewerMetadata.set_shape_from_configuration_experiment
      ~BigDataViewerMetadata.set_stack_order_from_configuration_experiment
      ~BigDataViewerMetadata.stage_positions_to_affine_matrix
      ~BigDataViewerMetadata.to_xml
      ~BigDataViewerMetadata.write_xml
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~BigDataViewerMetadata.configuration
      ~BigDataViewerMetadata.per_stack
      ~BigDataViewerMetadata.shape
      ~BigDataViewerMetadata.voxel_size
      ~BigDataViewerMetadata.shear_data
      ~BigDataViewerMetadata.shear_dimension
      ~BigDataViewerMetadata.shear_angle
      ~BigDataViewerMetadata.shear_transform
      ~BigDataViewerMetadata.rotate_data
      ~BigDataViewerMetadata.rotate_angle_x
      ~BigDataViewerMetadata.rotate_angle_y
      ~BigDataViewerMetadata.rotate_angle_z
      ~BigDataViewerMetadata.rotate_transform
      ~BigDataViewerMetadata.dx
      ~BigDataViewerMetadata.dy
      ~BigDataViewerMetadata.dz
      ~BigDataViewerMetadata.dt
      ~BigDataViewerMetadata.dc
      ~BigDataViewerMetadata.shape_x
      ~BigDataViewerMetadata.shape_y
      ~BigDataViewerMetadata.shape_z
      ~BigDataViewerMetadata.shape_t
      ~BigDataViewerMetadata.shape_c
      ~BigDataViewerMetadata.positions
      ~BigDataViewerMetadata.active_microscope
      ~BigDataViewerMetadata.misc