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Getting Started

  • Computer Considerations
  • Computer Power Configuration
  • Software Installation
  • Launching Navigate
  • Configuring Navigate
  • Acquiring Data
  • Smart Acquisition Routines

User Guide

  • Supported Hardware
  • Supported File Formats
  • User Interface Walkthrough
  • Setting Up a Microscope
  • Acquiring Data
  • Case Studies

Development

  • Contributing Guidelines
  • Developer Install
  • Software Architecture
  • Developer Architecture Concepts
  • Feature Container
  • REST API
  • Plugin Architecture
  • Adding New Hardware

Troubleshooting & Known Issues

  • Troubleshooting
  • Known Issues

Plugins

  • navigate Plugin Template
  • navigate Confocal Projection
  • navigate at Scale
  • navigate Constant Velocity Acquisition
  • navigate MMCore
  • navigate ilastik Server
  • navigate Photoactivation

Reference

  • Implemented Microscopes
  • Software API
    • navigate.config
    • navigate.controller
      • navigate.controller.configuration_controller
      • navigate.controller.configurator
      • navigate.controller.controller
      • navigate.controller.sub_controllers
        • navigate.controller.sub_controllers.acquire_bar
        • navigate.controller.sub_controllers.adaptive_optics
        • navigate.controller.sub_controllers.autofocus
        • navigate.controller.sub_controllers.camera_map
        • navigate.controller.sub_controllers.camera_settings
        • navigate.controller.sub_controllers.camera_view
        • navigate.controller.sub_controllers.channels_settings
        • navigate.controller.sub_controllers.channels_tab
        • navigate.controller.sub_controllers.diagnostics_popup
        • navigate.controller.sub_controllers.feature_advanced_setting
        • navigate.controller.sub_controllers.features_popup
        • navigate.controller.sub_controllers.gui
        • navigate.controller.sub_controllers.histogram
        • navigate.controller.sub_controllers.ilastik
        • navigate.controller.sub_controllers.keystrokes
        • navigate.controller.sub_controllers.menus
        • navigate.controller.sub_controllers.microscope_popup
        • navigate.controller.sub_controllers.multiposition
        • navigate.controller.sub_controllers.plugins
        • navigate.controller.sub_controllers.stages
        • navigate.controller.sub_controllers.stages_advanced
        • navigate.controller.sub_controllers.tiling
        • navigate.controller.sub_controllers.waveform_popup
        • navigate.controller.sub_controllers.waveform_tab
      • navigate.controller.thread_pool
    • navigate.controller.configurator
    • navigate.log_files
    • navigate.model
    • navigate.tools
    • navigate.view
navigate
  • Software API
  • navigate.controller
  • navigate.controller.sub_controllers
  • navigate.controller.sub_controllers.plugins
  • navigate.controller.sub_controllers.plugins.PluginsController
  • View page source

navigate.controller.sub_controllers.plugins.PluginsController

class navigate.controller.sub_controllers.plugins.PluginsController(view, parent_controller)

Bases: object

Plugins manager in the controller side

__init__(view, parent_controller)

Initialize plugins manager class.

Parameters:
  • view (object) – tkinter frame object.

  • parent_controller (object) – navigate controller.

Methods

__init__(view, parent_controller)

Initialize plugins manager class.

build_popup_window(plugin_name, frame, ...)

Build popup window for a plugin

build_tab_window(plugin_name, frame, controller)

Build tab for a plugin

load_plugins()

Load plugins

load_plugins_through_manager(plugin_manager)

Load plugins through plugin manager

populate_experiment_setting()

populate experiment values to plugin GUI

register_acquisition_mode(...)

Register acquisition mode

Attributes

view

tkinter frame object.

parent_controller

navigate controller.

plugins_dict

installed plugins with GUI

build_popup_window(plugin_name, frame, controller)

Build popup window for a plugin

Parameters:
  • plugin_name (str) – plugin name.

  • frame (object) – navigate frame object

  • controller (object) – navigate controller

build_tab_window(plugin_name, frame, controller)

Build tab for a plugin

Parameters:
  • plugin_name (str) – plugin name.

  • frame (object) – navigate frame object

  • controller (object) – Controller Class

load_plugins()

Load plugins

load_plugins_through_manager(plugin_manager)

Load plugins through plugin manager

Parameters:

plugin_manager (object) – PluginManager object

populate_experiment_setting()

populate experiment values to plugin GUI

register_acquisition_mode(acquisition_mode_name, module)

Register acquisition mode

Parameters:
  • acquisition_mode_name (str) – The name of an acquisition mode

  • module (module) – acquisition mode module

parent_controller

navigate controller.

Type:

object

plugins_dict

installed plugins with GUI

Type:

dict

view

tkinter frame object.

Type:

object

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© Copyright 2026, Dean Lab, UT Southwestern Medical Center.