navigate.model.analysis.boundary_detect

Functions

binary_detect(img_data, boundary[, width, ...])	Perform a binary search for tissue on an image.
find_cell_boundary_3d(z_stack_image)	A default label volume image function
find_tissue_boundary_2d(image_data[, mag_ratio])	Find all pixels containing tissue, based on an Otsu threshold.
has_tissue(image_data, x, y, width[, ...])	Determine if an image contains tissue.
map_boundary(boundary[, direction])	Map boundary to a path.
map_labels(labeled_image, position, z_start, ...)	Map labels to positions